Description
The ProteinsPlus web server (https://proteins.plus) [1] offers modelling support for in-depth investigation of biomolecules. Users can perform computational studies for experimental protein structures from the Protein Data Bank (PDB) [2] and predicted models from the AlphaFold Protein Structure Database [3].
The services include structure quality analyses, structure preparation, geometric analyses, pocket prediction and characterization, binding site comparison, automated molecular docking, 2D interaction visualization, protein-protein interface classification, and mutation analyses.
In this contribution, we will present the ProteinsPlus web server in a nutshell with implications on their potential application domains in structure-based design.
[1] Schöning-Stierand et al. (2020). Nucleic Acids Res 48, W48-W53.
[2] Berman et al. (2000). Nucleic Acids Res 28, 235-242.
[3] Jumper et al. (2021). Nature 596, 583-589.
Keywords
ComputationalMolecularDesign
ProteinStructures
DrugDesign
WebServer
DataScience
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